LogoBar examples and sample files



Globin sample & example
TEA domain sample & example
ETS domain sample & example
Traditional style character logo example
Main LogoBar Web Page







Sample file with seven globin sequences

Screen shot of the globin ClustalX multiple sequence alignment (Mac Os 9), PDF file.

The ClustalX aln file sample file.

Screen shot of
LogoBar with a globin sequence logo, using Cinema coloring scheme:

Globin logobar







Sample file with 44 TEA domain sequences (retrieved from PFAM, and edited to remove incomplete sequences)

Screen shot of the TEA domain ClustalX multiple sequence alignment (Mac Os 9),
PDF file.

ClustalX aln file

Screen shot of a TEA domain LogoBar, using Cinema coloring scheme:

TEA domain LogoBar






Sample file with 280 ETS domain sequences (retrieved from PFAM, edited to remove incomplete sequences)

Screen shot of part of the ETS domain ClustalX multiple sequence alignment (Mac Os 9), PDF file.

ClustalX aln file

LogoBar screen shot of ETS domains, using custom coloring scheme, amino acids listed at bottom in decreasing order of frequency:

Ets domain LogoBar




Comparison of ETS domain Logos created with WebLogo and LogoBar (using similar coloring scheme)

TEA domain WebLogo

TEA domain LogoBar to compare




Comparison of ETS domain Logos created with WebLogo and LogoBar when the Y-axis is higher:

ETS domain zoomed in WebLogo

ETS domain zoomed into LogoBar






Sample of a logo generated with LogoBar using the option of a traditional character style logo.

traditional character logo